Deep
Research
The cortex turns to glass so you can see the deep structures inside my brain, reconstructed from my own MRI. Click a structure to name it. These case studies are the work beneath the surface, and each one states its status plainly.
One brain, twenty pipelines: how much do open-source neuroimaging tools agree?
I ran one T1-weighted MRI of my own brain through about 20 open-source segmentation tools and models, then compared what they report.
- neuroimaging
- structural-mri
- freesurfer
- segmentation
- reproducibility
- foundation-models
Structural MRI and machine learning in PTSD (ZVR Lab)
A FreeSurfer and Python pipeline for structural MRI from 101 participants, with covariate-adjusted group statistics and exploratory machine-learning classification.
- neuroimaging
- structural-mri
- freesurfer
- statistics
- machine-learning
- python
Head modeling and electric-field simulation (Bikson Lab)
Building head models, placing stimulation electrodes, and simulating the electric fields they produce, in an ongoing mentored project.
- neuromodulation
- head-modeling
- fea